SUPERFAMILY 1.73 HMM library and genome assignments server

Domain assignment for gi|16131884|ref|NP_418482.1| from Escherichia coli K-12 subMG1655

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|16131884|ref|NP_418482.1|
Domain Number 1 Region: 1-52,679-913
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 1.35e-57
Family ABC transporter ATPase domain-like 0.0036
Further Details:      
 
Domain Number 2 Region: 12-40,73-124,454-551,578-651,815-926
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 1.52e-32
Family ABC transporter ATPase domain-like 0.0051
Further Details:      
 
Weak hits

Sequence:  gi|16131884|ref|NP_418482.1|
Domain Number - Region: 23-64,104-211,257-296
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 0.0218
Family Nucleotide and nucleoside kinases 0.086
Further Details:      
 

Protein sequence

External link(s) gi|16131884|ref|NP_418482.1|
Sequence length 940
Comment ATPase and DNA damage recognition protein of nucleotide excision repair excinuclease UvrABC [Escherichia coli str. K-12 substr. MG1655]
Sequence
MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC
PDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARID
GEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDP
KAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPEL
SLAGGAIRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKY
MNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARH
VYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTL
SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNT
VIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEV
PKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQR
QLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPE
SRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKY
KGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKL
ARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADW
IVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML
Download sequence
Identical sequences A7ZUS9 A8A7F8 B1IUJ3 B1LPM3 B2TX89 B3HID7 B3I394 B3IGQ2 B3WIY9 B6I5S5 B7LB07 B7M7X2 B7NG02 B7NSM0 P0A698 P0A699 Q0SXS5 Q31TT8 Q3YUS6
gi|260858169|ref|YP_003232060.1| gi|24115351|ref|NP_709861.1| gi|209921543|ref|YP_002295627.1| gi|170684169|ref|YP_001746448.1| gi|74314552|ref|YP_312971.1| gi|89110779|ref|AP_004559.1| gi|218702723|ref|YP_002410352.1| gi|110807925|ref|YP_691445.1| gi|157163527|ref|YP_001460845.1| gi|260846853|ref|YP_003224631.1| gi|218556616|ref|YP_002389530.1| eco002004019.1 ER581 SdR80 SfR312 gi|170021943|ref|YP_001726897.1| gi|187730738|ref|YP_001882750.1| gi|30064647|ref|NP_838818.1| gi|260870818|ref|YP_003237220.1| gi|157157192|ref|YP_001465558.1| gi|82546401|ref|YP_410348.1| gi|238903168|ref|YP_002928964.1| gi|218697767|ref|YP_002405434.1| gi|218707680|ref|YP_002415199.1|

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